TDK Research & Consulting

Publications

217 citations | h-index 9 | i10-index 9
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Blood Research & Hemostasis

Fu A., Kazmirchuk T.D.D., Bradbury-Jost C., Golshani A., Othman M. (2024). Platelet-type von Willebrand disease: complex pathophysiology and insights on novel therapeutic and diagnostic strategies. Seminars in Thrombosis and Hemostasis. DOI

AI-Driven Peptide Design

Al-Gafari M., Kazmirchuk T.D.D., Moteshareie H., Wang J., Anoop V., Golshani A., Azam T. (2026). Host-pathogen protein interaction analysis identifies novel virulence determinants in Candida. Cell Reports. In preparation.
Wang J., Kazmirchuk T.D.D., Hajikarimlou M., Al-Gafari M., Takallou S., Dehne F., Samanfar B., Babu M., Azad T., Golshani A. (2025). Artificial intelligence reveals nature: functional parallels between a designed and a natural peptide. International Journal of Molecular Sciences. DOI
Burnside D.J., Schoenrock A., Moteshareie H., Hooshyar M., Basra P., Hajikarimlou M., Dick K., Barnes B., Kazmirchuk T., Jessulat M., Pitre S., Samanfar B., Babu M., Green J.R., Wong A., Dehne F., Biggar K.K., Golshani A. (2019). In silico engineering of synthetic binding proteins from random amino acid sequences. iScience. DOI
Kazmirchuk T., Dick K., Burnside D.J., Barnes B., Moteshareie H., Hajikarimlou M., Omidi K., Ahmed D., Low A., Lettl C., Hooshyar M., Schoenrock A., Pitre S., Babu M., Cassol E., Samanfar B., Wong A., Dehne F., Green J.R., Golshani A. (2017). Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions. Computational Biology and Chemistry. DOI

Cell & Molecular Biology

Takallou S., Lancaster R., Kinshina S., Kazmirchuk T.D.D., Golshani A., Fletcher E. (2026). Terephthalate, a PET plastic monomer, reprograms phosphate metabolism in yeast. PNAS. Under review.
Al-Gafari M., Moteshareie H., Kazmirchuk T.D.D., Wang J., Takallou S., Khosravifar P., Hooshyar M., Samanfar B., Golshani A. (2025). Regulation of gene expression in response to heavy metal toxicity. FASEB Journal. Under revision.
Al-Gafari M., Jagadeesan S.K., Kazmirchuk T.D.D., Takallou S., Wang J., Hajikarimlou M., Ramessur N.B., Darwish W., Bradbury-Jost C., Moteshareie H., Said K.B., Samanfar B., Golshani A. (2024). Investigating the activities of CAF20 and ECM32 in the regulation of PGM2 mRNA translation. Biology. DOI
Zhang C., Hurst L.R., Gokbayrak Z.D., Calderin J.D., Hrabak M.R., Balutowski A., Rivera-Kohr D.A., Kazmirchuk T.D.D., Brett C.L., Fratti R.A. (2024). Sphingolipids regulate Ypt7 function during the tethering stage of vacuole fusion. Journal of Biological Chemistry. DOI
Kazmirchuk T.D.D., Burnside D.J., Wang J., Jagadeesan S.K., Al-Gafari M., Silva E., Potter T., Bradbury-Jost C., Ramessur N.B., Ellis B., Takallou S., Hajikarimlou M., Moteshareie H., Said K.B., Samanfar B., Fletcher E., Golshani A. (2024). Cymoxanil disrupts RNA synthesis through inhibiting dihydrofolate reductase. Scientific Reports. DOI
Logan C.J., Staton C., Oliver J.T., Bouffard J., Kazmirchuk T.D.D., Magi M., Brett C.L. (2024). Thermotolerance in S. cerevisiae as a model to study extracellular vesicle biology. Journal of Extracellular Vesicles. DOI
Takallou S., Hajikarimlou M., Al-Gafari M., Wang J., Kazmirchuk T.D.D., Said K.B., Samanfar B., Golshani A. (2024). The involvement of BSC5 in protein synthesis in baker’s yeast. Biology. DOI
Takallou S., Hajikarimlou M., Al-Gafari M., Wang J., Jagadeesan S.K., Kazmirchuk T.D.D., Moteshareie H., Indrayanti A.M., Holcik M., Samanfar B., Smith M., Golshani A. (2024). Hydrogen peroxide sensitivity connects the activity of COX5A and NPR3 to YAP1 expression. FASEB Journal. DOI
Takallou S., Hajikarimlou M., Al-Gafari M., Wang J., Jagadeesan S.K., Kazmirchuk T.D.D., Arnoczki C., Moteshareie H., Mohamed K., Azad T., Holcik M., Samanfar B., Smith M., Golshani A. (2024). Oxidative stress-induced YAP1 expression is regulated by NCE102, CDA2, and BCS1. The FEBS Journal. DOI
Jagadeesan S.K., Al-Gafari M., Wang J., Takallou S., Allard D., Hajikarimlou M., Kazmirchuk T.D.D., Moteshareie H., Tayabali A., Nokhbeh M.R., Smith M., Samanfar B., Golshani A. (2022). DBP7 and YRF1-6 regulate PGM2 mRNA translation. International Journal of Molecular Sciences. DOI
Golden C.K., Kazmirchuk T.D.D., McNally E.K., El-Eissawi M., Gokbayrak Z.D., Richard J.D., Brett C.L. (2022). A two-tiered system for surface receptor and transporter down-regulation. PLoS Genetics. DOI
Hajikarimlou M., Moteshareie H., Omidi K., Hooshyar M., Shaikho S., Kazmirchuk T., Burnside D., Takallou S., Zare N., Jagadeesan S.K., Puchacz N., Babu M., Smith M., Holcik M., Samanfar B., Golshani A. (2020). Sensitivity of yeast to lithium chloride connects YTA6 and YPR096C to translation of structured mRNAs. PLoS ONE. DOI
Moteshareie H., Hajikarimlou M., Indrayanti A.M., Burnside D.J., Dias A.P., Lettl C., Ahmed D., Omidi K., Kazmirchuk T., Puchacz N., Zare N., Takallou S., Naing T., Hernandez R.B., Willmore W.G., Babu M., McKay B., Samanfar B., Holcik M., Golshani A. (2018). ITT1 and RPS1A influence arsenite sensitivity via URE2 expression. PLoS ONE. DOI
Mattie S., Kazmirchuk T., Mui J., Vali H., Brett C.L. (2019). Visualization of SNARE-mediated hemifusion by electron microscopy. Methods in Molecular Biology. DOI
Omidi K., Jessulat M., Hooshyar M., Burnside D.J., Schoenrock A., Kazmirchuk T., Hajikarimlou M., Daniel M., Moteshareie H., Bhojoo U., Sanders M., Ramotar D., Dehne F., Samanfar B., Babu M., Golshani A. (2018). HUR1 influences non-homologous end-joining repair. Gene. DOI
Samanfar B., Shostak K., Moteshareie H., Hajikarimlou M., Shaikho S., Omidi K., Hooshyar M., Burnside D., Marques I.G., Kazmirchuk T., Naing T., Ludovico P., York-Lyon A., Szereszewski K., Leung C., Jin J.Y., Megarbane R., Smith M.L., Babu M., Holcik M., Golshani A. (2017). Dom34 and Rpl36A influence acetic acid sensitivity in yeast. PeerJ. DOI